Bioinformatics and Biology Insights

Evolutionary Pattern of N-Glycosylation Sequon Numbers  in Eukaryotic ABC Protein Superfamilies (9002 Views since 17 Feb 2010)

Download Full Open Access Article in PDF Format (782.02 KB) Order reprints

Software for Quantifying and Simulating Microsatellite Genotyping Error (6516 Views)

Download Full Open Access Article in PDF Format (630.49 KB) Order reprints

Gromita: A Fully Integrated Graphical User Interface to Gromacs 4 (8048 Views since 07 Sep 2009)

Download Full Open Access Article in PDF Format (2.40 MB) Order reprints

Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization (6841 Views since 03 Jun 2009)

Download Full Open Access Article in PDF Format (612.34 KB) Order reprints

Bioinformatics as a Tool for Assessing the Quality of Sub-Cellular Proteomic Strategies and Inferring Functions of Proteins: Plant Cell Wall Proteomics as a Test Case (7098 Views since 18 Feb 2009)

Download Full Open Access Article in PDF Format (1.61 MB) Order reprints

Normalization and Gene p-Value Estimation: Issues in Microarray Data Processing (7364 Views since 28 May 2008)

Download Full Open Access Article in PDF Format (1.67 MB) Order reprints

Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences (8312 Views since 01 Jul 2009)

Download Full Open Access Article in PDF Format (9.28 MB) Order reprints

Neuroinformatics: From Bioinformatics to Databasing the Brain (8095 Views since 14 May 2008)

Download Full Open Access Article in PDF Format (6.11 MB) Order reprints

Gene Expression Based Leukemia Sub‑Classification Using Committee Neural Networks (6969 Views since 03 Sep 2009)

Download Full Open Access Article in PDF Format (4.34 MB) Order reprints

Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach (5585 Views since 21 Jan 2008)

Download Full Open Access Article in PDF Format (207.05 KB) Order reprints

affyPara - a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data (6198 Views since 22 Jul 2009)

Download Full Open Access Article in PDF Format (487.68 KB) Order reprints

Classifying Coding DNA with Nucleotide Statistics (6383 Views since 28 Oct 2009)

Download Full Open Access Article in PDF Format (1.85 MB) Order reprints

Identification of the RGG Box Motif in Shadoo: RNA-Binding and Signaling Roles? (7618 Views since 19 Nov 2008)

Download Full Open Access Article in PDF Format (443.60 KB) Order reprints

Unsupervised Meta-Analysis on Diverse Gene Expression Datasets Allows Insight into Gene Function and Regulation (5666 Views since 26 May 2008)

Download Full Open Access Article in PDF Format (503.44 KB) Order reprints

Methodology for Constructing Problem Definitions in Bioinformatics (5701 Views since 24 Apr 2008)

Download Full Open Access Article in PDF Format (705.86 KB) Order reprints

Universal Features for the Classification of Coding and Non-Coding DNA Sequences (7234 Views since 03 Jun 2009)

Download Full Open Access Article in PDF Format (928.11 KB) Order reprints

Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism (6226 Views since 31 Mar 2010)

Download Full Open Access Article in PDF Format (663.14 KB) Order reprints

Gene Copy Number Analysis for Family Data Using Semiparametric Copula Model (7160 Views since 26 Sep 2008)

Download Full Open Access Article in PDF Format (585.34 KB) Order reprints

Sequence Analysis of the Full-length cDNA and Protein Structure Homology Modeling of FABP2 from Paralichthys Olivaceus (6107 Views since 04 Jun 2009)

Download Full Open Access Article in PDF Format (1.55 MB) Order reprints

An Improved Approach for Mapping Quantitative Trait Loci in a Pseudo-Testcross: Revisiting a Poplar Mapping Study (6735 Views since 04 Feb 2010)

Download Full Open Access Article in PDF Format (605.61 KB) Order reprints

Association Between a Prognostic Gene Signature and Functional Gene Sets (5517 Views since 22 Sep 2008)

Download Full Open Access Article in PDF Format (1.05 MB) Order reprints

Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences (6233 Views since 11 Nov 2009)

Download Full Open Access Article in PDF Format (8.69 MB) Order reprints

Identification and Investigation of Drosophila  Postsynaptic Density Homologs (5892 Views since 03 Nov 2008)

Download Full Open Access Article in PDF Format (1.85 MB) Order reprints

Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out Data (5560 Views since 21 Oct 2009)

Download Full Open Access Article in PDF Format (7.40 MB) Order reprints

IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites (5389 Views since 03 Oct 2008)

Download Full Open Access Article in PDF Format (474.08 KB) Order reprints

Identification of Drought-Responsive Universal Stress Proteins in Viridiplantae (9028 Views since 07 Feb 2011)

Download Full Open Access Article in PDF Format (2.18 MB) Order reprints

Control Design for Signal Transduction Networks (5373 Views since 09 Feb 2009)

Download Full Open Access Article in PDF Format (1.20 MB) Order reprints

Expression of Metabolic, Tissue Remodeling, Oxidative Stress, and Inflammatory Pathways in Mammary Tissue During Involution in Lactating Dairy Cows (7002 Views since 20 Sep 2010)

Download Full Open Access Article in PDF Format (1.13 MB) Order reprints

Effects of Feeding Periods of High Cholesterol and Saturated Fat Diet on Blood Biochemistry and Hydroxyproline Fractions in Rabbits (5060 Views since 22 Apr 2008)

Download Full Open Access Article in PDF Format (313.58 KB) Order reprints

Ontologies for Bioinformatics (6015 Views since 12 Mar 2008)

Download Full Open Access Article in PDF Format (1.84 MB) Order reprints

Domain Organization of Long Autotransporter Signal Sequences (5324 Views since 14 Dec 2009)

Download Full Open Access Article in PDF Format (2.86 MB) Order reprints

Borges Dilemma, Fundamental Laws, and Systems Biology (4819 Views since 10 Apr 2008)

Download Full Open Access Article in PDF Format (163.96 KB) Order reprints

A Rough Set-Based Model of HIV-1 Reverse Transcriptase Resistome (6625 Views since 05 Oct 2009)

Download Full Open Access Article in PDF Format (4.00 MB) Order reprints

The Use of Artificial Neural Networks in Prediction of Congenital CMV Outcome from Sequence Data (4921 Views since 29 May 2008)

Download Full Open Access Article in PDF Format (605.87 KB) Order reprints

An Efficient Method to Identify Conditionally Activated Transcription Factors and their Corresponding Signal Transduction Pathway Segments (5154 Views since 17 Nov 2009)

Download Full Open Access Article in PDF Format (600.34 KB) Order reprints

Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma (4464 Views since 01 Feb 2008)

Download Full Open Access Article in PDF Format (2.03 MB) Order reprints

Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data (4232 Views)

Download Full Open Access Article in PDF Format (748.38 KB) Order reprints

Evidence of Highly Regulated Genes (in-Hubs) in Gene Networks of Saccharomyces Cerevisiae (4705 Views since 14 Jul 2008)

Download Full Open Access Article in PDF Format (543.90 KB) Order reprints

Graphical User Interfaces for Molecular Dynamics—Quo Vadis? (5287 Views since 23 Sep 2009)

Download Full Open Access Article in PDF Format (565.57 KB) Order reprints

Gene Networks Driving Bovine Mammary Protein Synthesis During the Lactation Cycle (7403 Views since 04 May 2011)

Download Full Open Access Article in PDF Format (5.21 MB) Order reprints

Evaluation of Combining Several Statistical Methods with a Flexible Cutoff for Identifying Differentially Expressed Genes in Pairwise Comparison of EST Sets (4400 Views since 01 May 2008)

Download Full Open Access Article in PDF Format (2.04 MB) Order reprints

Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines (4570 Views)

Download Full Open Access Article in PDF Format (497.55 KB) Order reprints

Coarse-Grained Models Reveal Functional Dynamics - I. Elastic Network Models – Theories, Comparisons and Perspectives (4395 Views since 04 Mar 2008)

Download Full Open Access Article in PDF Format (819.92 KB) Order reprints

A New Test Statistic Based on Shrunken Sample Variance for Identifying Differentially Expressed Genes in Small Microarray Experiments (4237 Views since 29 Feb 2008)

Download Full Open Access Article in PDF Format (1.67 MB) Order reprints

Normal Mode Flexible Fitting of High-Resolution Structures of Biological Molecules Toward SAXS Data (5402 Views since 21 Jun 2010)

Download Full Open Access Article in PDF Format (3.71 MB) Order reprints

Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets (4034 Views since 01 Feb 2008)

Download Full Open Access Article in PDF Format (651.68 KB) Order reprints

Insights into Protein Sequence and Structure-Derived Features Mediating 3D Domain Swapping Mechanism using Support Vector Machine Based Approach (5329 Views since 17 Jun 2010)

Download Full Open Access Article in PDF Format (970.20 KB) Order reprints

GSMA: Gene Set Matrix Analysis, An Automated Method for Rapid Hypothesis Testing of Gene Expression Data (4154 Views)

Download Full Open Access Article in PDF Format (1.07 MB) Order reprints

Conceptual Aspects of Large Meta-Analyses with Publicly Available Microarray Data: A Case Study in Oncology (5272 Views since 23 Jan 2011)

Download Full Open Access Article in PDF Format (816.45 KB) Order reprints

Peptide Vocabulary Analysis Reveals Ultra-Conservation and Homonymity in Protein Sequences (5439 Views)

Download Full Open Access Article in PDF Format (993.47 KB) Order reprints