Publication Date: 06 Feb 2007
Journal: Evolutionary Bioinformatics
Citation: Evolutionary Bioinformatics 2006:2 179-182
1Department of Biological Sciences, Stanford University, Stanford, CA, USA. 2Department of Microbiology, University of Hong Kong, Hong Kong SAR, China. 3Department of Biochemistry, University of Hong Kong, Hong Kong SAR, China. 4Department of Biology, University of Ottawa, Ottawa, Ontario, Canada.
Abstract: MBEToolbox is an extensible MATLAB-based software package for analysis of DNA and protein sequences. MBEToolbox version 2.0 includes enhanced functions for phylogenetic analyses by the maximum likelihood method. For example, it is capable of estimating the synonymous and nonsynonymous substitution rates using a novel or several known codon substitution models. MBEToolbox 2.0 introduces new functions for estimating site-specific evolutionary rates by using a maximum likelihood method or an empirical Bayesian method. It also incorporates several different methods for recombination detection. Multi-platform versions of the software are freely available at http://www.bioinformatics.org/mbetoolbox/.
PDF (183.53 KB PDF FORMAT)
RIS citation (ENDNOTE, REFERENCE MANAGER, PROCITE, REFWORKS)
BibTex citation (BIBDESK, LATEX)
This is the fastest progress we have experienced from submission to acceptance. Reviews are fast, pertinent, and instructive. Every step of the process is visible and prompt, and every email is friendly and immediate. In all, it is an excellent experience to be published in Libertas Academica.
All authors are surveyed after their articles are published. Authors are asked to rate their experience in a variety of areas, and their responses help us to monitor our performance. Presented here are their responses in some key areas. No 'poor' or 'very poor' responses were received; these are represented in the 'other' category.See Our Results
Copyright © 2013 Libertas Academica Ltd (except open access articles and accompanying metadata and supplementary files.)
Facebook Google+ Twitter
Pinterest Tumblr YouTube