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Biomedical Informatics Insights



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Editor in Chief: John P. Pestian

Indexing & Databases: Pubmed, EBSCO Academic Search International, Gale Academic OneFile, Gale Health Reference Centre, Gale InfoTrac Custom Journals, Illustrata-Natural Science, Illustrata-Technology, ProQuest Biological Sciences, ProQuest Computer Science, ProQuest Engineering, ProQuest Natural Sciences, ProQuest SciTech, ProQuest Technology, Pubmed Central

Journal Directories: EBSCO A-Z

Processing Speed: Blind peer review by minimum of two expert reviewers and independent editorial decision within three to four weeks. Publication within average four weeks following acceptance.

ISSN: 1178-2226



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Some Correlates of Electronic Health Information Management System Success in Nigerian Teaching Hospitals
Adebowale I. Ojo and Sunday O. Popoola
Biomedical Informatics Insights 2015:7 1-9
Original Research | Published on 01 Apr 2015



Combining an Expert-Based Medical Entity Recognizer to a Machine-Learning System: Methods and a Case Study
Pierre Zweigenbaum, Thomas Lavergne, Natalia Grabar, Thierry Hamon, Sophie Rosset and Cyril Grouin
Biomedical Informatics Insights 2013:6 Suppl. 1 51-62
Original Research | Published on 01 Aug 2013



Text Categorization of Heart, Lung, and Blood Studies in the Database of Genotypes and Phenotypes (dbGaP) Utilizing n-grams and Metadata Features
Mindy K. Ross, Ko-Wei Lin, Karen Truong, Abhishek Kumar and Mike Conway
Biomedical Informatics Insights 2013:6 35-45
Original Research | Published on 22 Jul 2013



Using Conversation Topics for Predicting Therapy Outcomes in Schizophrenia
Christine Howes, Matthew Purver and Rose McCabe
Biomedical Informatics Insights 2013:Suppl. 1 39-50
Original Research | Published on 15 Jul 2013



Computational Semantics in Clinical Text Supplement
John P. Pestian, Ph.D
Biomedical Informatics Insights 2013:6 (Suppl. 1) 1-2
Editorial | Published on 24 Jun 2013



Computational Semantics in Clinical Text
Stephen Wu
Biomedical Informatics Insights 2013:Suppl. 1 3-5
Editorial | Published on 24 Jun 2013 | Video abstract



Analysis of Cross-Institutional Medication Description Patterns in Clinical Narratives
Sunghwan Sohn, Cheryl Clark, Scott R. Halgrim, Sean P. Murphy, Siddhartha R. Jonnalagadda, Kavishwar B. Wagholikar, Stephen T. Wu, Christopher G. Chute and Hongfang Liu
Biomedical Informatics Insights 2013:Suppl. 1 7-16
Original Research | Published on 24 Jun 2013



Using Empirically Constructed Lexical Resources for Named Entity Recognition
Siddhartha Jonnalagadda, Trevor Cohen, Stephen Wu, Hongfang Liu and Graciela Gonzalez
Biomedical Informatics Insights 2013:Suppl. 1 17-27
Original Research | Published on 24 Jun 2013



Towards Converting Clinical Phrases into SNOMED CT Expressions
Rohit J. Kate
Biomedical Informatics Insights 2013:Suppl. 1 29-37
Original Research | Published on 24 Jun 2013



Using n-Grams for Syndromic Surveillance in a Turkish Emergency Department Without English Translation: A Feasibility Study
Sylvia Halász, Philip Brown, Cem Oktay, Arif Alper Çevik, Isa Kiliçaslan, Colin Goodall, Dennis G Cochrane, Thomas R Fowler, Guy Jacobson, Simon Tse and John R Allegra
Biomedical Informatics Insights 2013:6 29-33
Original Research | Published on 25 Apr 2013



Recognizing Scientific Artifacts in Biomedical Literature
Tudor Groza, Hamed Hassanzadeh and Jane Hunter
Biomedical Informatics Insights 2013:6 15-27
Original Research | Published on 02 Apr 2013



Decomposing Phenotype Descriptions for the Human Skeletal Phenome
Tudor Groza, Jane Hunter and Andreas Zankl
Biomedical Informatics Insights 2013:6 1-14
Original Research | Published on 04 Feb 2013



What’s In a Note: Construction of a Suicide Note Corpus
John P. Pestian, Pawel Matykiewicz and Michelle Linn-Gust
Biomedical Informatics Insights 2012:5 1-6
Original Research | Published on 05 Nov 2012



Statistical and Similarity Methods for Classifying Emotion in Suicide Notes
Kirk Roberts and Sanda M. Harabagiu
Biomedical Informatics Insights 2012:5 (Suppl. 1) 195-204
Original Research | Published on 30 Jan 2012



Rule-based and Lightly Supervised Methods to Predict Emotions in Suicide Notes
Ted Pedersen
Biomedical Informatics Insights 2012:5 (Suppl. 1) 185-193
Original Research | Published on 30 Jan 2012



Three Hybrid Classifiers for the Detection of Emotions in Suicide Notes
Maria Liakata, Jee-Hyub Kim, Shyamasree Saha, Janna Hastings, and Dietrich Rebholz-Schuhmann
Biomedical Informatics Insights 2012:5 (Suppl. 1) 175-184
Original Research | Published on 30 Jan 2012



Binary Classifiers and Latent Sequence Models for Emotion Detection in Suicide Notes
Colin Cherry, Saif M. Mohammad and Berry de Bruijn
Biomedical Informatics Insights 2012:5 (Suppl. 1) 147-154
Original Research | Published on 30 Jan 2012



Discovering Fine-grained Sentiment in Suicide Notes
Wenbo Wang, Lu Chen, Ming Tan, Shaojun Wang and Amit P. Sheth
Biomedical Informatics Insights 2012:5 (Suppl. 1) 137-145
Original Research | Published on 30 Jan 2012



Early Fusion of Low Level Features for Emotion Mining
Fabon Dzogang, Marie-Jeanne Lesot, Maria Rifqi, and Bernadette Bouchon-Meunier
Biomedical Informatics Insights 2012:5 (Suppl. 1) 129-136
Original Research | Published on 30 Jan 2012



A Hybrid System for Emotion Extraction from Suicide Notes
Azadeh Nikfarjam, Ehsan Emadzadeh and Graciela Gonzalez
Biomedical Informatics Insights 2012:5 (Suppl. 1) 165-174
Original Research | Published on 30 Jan 2012



Leveraging Psycholinguistic Resources and Emotional Sequence Models for Suicide Note Emotion Annotation
Eric Yeh, William Jarrold and Joshua Jordan
Biomedical Informatics Insights 2012:5 (Suppl. 1) 155-163
Original Research | Published on 30 Jan 2012



Combining Lexico-semantic Features for Emotion Classification in Suicide Notes
Bart Desmet, and VĂ©ronique Hoste
Biomedical Informatics Insights 2012:5 (Suppl. 1) 125-128
Original Research | Published on 30 Jan 2012



Introductory Editorial
John P. Pestian
Biomedical Informatics Insights 2012:5 (Suppl. 1) 1
Editorial | Published on 30 Jan 2012



Sentiment Analysis of Suicide Notes: A Shared Task
John P. Pestian, Pawel Matykiewicz, Michelle Linn-Gust, Brett South, Ozlem Uzuner, Jan Wiebe, Kevin B. Cohen, John Hurdle, Christopher Brew
Biomedical Informatics Insights 2012:5 (Suppl. 1) 3-16
Original Research | Published on 30 Jan 2012



A Hybrid Model for Automatic Emotion Recognition in Suicide Notes
Hui Yang, Alistair Willis, Anne de Roeck and Bashar Nuseibeh,
Biomedical Informatics Insights 2012:5 (Suppl. 1) 17-30
Original Research | Published on 30 Jan 2012



Suicide Note Sentiment Classification: A Supervised Approach Augmented by Web Data
Yan Xu, Yue Wang,, Jiahua Liu, Zhuowen Tu, Jian-Tao Sun, Junichi Tsujii and Eric Chang
Biomedical Informatics Insights 2012:5 (Suppl. 1) 31-41
Original Research | Published on 30 Jan 2012



A Hybrid Approach to Sentiment Sentence Classification in Suicide Notes
Sunghwan Sohn, Manabu Torii, Dingcheng Li, Kavishwar Wagholikar, Stephen Wu and Hongfang Liu
Biomedical Informatics Insights 2012:5 (Suppl. 1) 43-50
Original Research | Published on 30 Jan 2012



Emotion Detection in Suicide Notes using Maximum Entropy Classification
Richard Wicentowski and Matthew R. Sydes
Biomedical Informatics Insights 2012:5 (Suppl. 1) 51-60
Original Research | Published on 30 Jan 2012



Fine-Grained Emotion Detection in Suicide Notes: A Thresholding Approach to Multi-Label Classification
Kim Luyckx, Frederik Vaassen, Claudia Peersman and Walter Daelemans
Biomedical Informatics Insights 2012:5 (Suppl. 1) 61-69
Original Research | Published on 30 Jan 2012



LASSA: Emotion Detection via Information Fusion
Ning Yu, Sandra Kübler, Joshua Herring, Yu-Yin Hsu, Ross Israel and Charese Smiley
Biomedical Informatics Insights 2012:5 (Suppl. 1) 71-76
Original Research | Published on 30 Jan 2012



Using Ensemble Models to Classify the Sentiment Expressed in Suicide Notes
James A. McCart, Dezon K. Finch, Jay Jarman, Edward Hickling, Jason D. Lind, Matthew R. Richardson, Donald J. Berndt and Stephen L. Luther
Biomedical Informatics Insights 2012:5 (Suppl. 1) 77-85
Original Research | Published on 30 Jan 2012



A Naïve Bayes Approach to Classifying Topics in Suicide Notes
Irena Spasic, Pete Burnap, Mark Greenwood and Michael Arribas-Ayllon
Biomedical Informatics Insights 2012:5 (Suppl. 1) 87-97
Original Research | Published on 30 Jan 2012



Labeling Emotions in Suicide Notes: Cost-Sensitive Learning with Heterogeneous Features
Jonathon Read, Erik Velldal and Lilja Øvrelid
Biomedical Informatics Insights 2012:5 (Suppl. 1) 99-103
Original Research | Published on 30 Jan 2012



A Combined Approach to Emotion Detection in Suicide Notes
Alexander Pak, Delphine Bernhard, Patrick Paroubek and Cyril Grouin
Biomedical Informatics Insights 2012:5 (Suppl. 1) 105-114
Original Research | Published on 30 Jan 2012



Topic Categorisation of Statements in Suicide Notes with Integrated Rules and Machine Learning
Aleksandar Kovacevic, Azad Dehghan, John A. Keane and Goran Nenadic
Biomedical Informatics Insights 2012:5 (Suppl. 1) 115-124
Original Research | Published on 30 Jan 2012



Comparison of LDA and SPRT on Clinical Dataset Classifications
Chih Lee, Brittany Nkounkou and Chun-Hsi Huang
Biomedical Informatics Insights 2011:4 1-7
Original Research | Published on 19 Apr 2011



Differential Transcriptional Changes in Mice Exposed to Chemically Distinct Diesel Samples
Tina Stevens, Susan Hester and M. Ian Gilmour
Biomedical Informatics Insights 2010:3 29-52
Original Research | Published on 12 Aug 2010



Suicide Note Classification Using Natural Language Processing: A Content Analysis
John Pestian, Henry Nasrallah, Pawel Matykiewicz, Aurora Bennett and Antoon Leenaars
Biomedical Informatics Insights 2010:3 19-28
Original Research | Published on 04 Aug 2010



Risk Judgment by General Dental Practitioners: Rational but Uninformed
Eva Ellervall, Berndt Brehmer and Kerstin Knutsson
Biomedical Informatics Insights 2010:3 11-17

Original Research | Published on 29 Apr 2010



A Method to Detect Differential Gene Expression in Cross-Species Hybridization Experiments at Gene  and Probe Level
Ying Chen, Rebekah Wu, James Felton, David M. Rocke and Anu Chakicherla
Biomedical Informatics Insights 2010:3 1-10
Original Research | Published on 05 Mar 2010



Enhancing Disease Surveillance Event Communication Among Jurisdictions
Nathaniel R. Tabernero, Wayne A. Loschen, Joel Jorgensen, Joshua Suereth, Jacqueline S. Coberly,  Rekha S. Holtry, Marvin L. Sikes, Steven M. Babin and Sheryl L. Happel Lewis
Biomedical Informatics Insights 2009:2 31-41

Original Research | Published on 22 Jan 2010



Personalizing Drug Selection Using Advanced Clinical Decision Support
John Pestian, Malik Spencer, Pawel Matykiewicz, Kejian Zhang, Sander Vinks and Tracy Glauser
Biomedical Informatics Insights 2009:2 19-29
Case Report | Published on 23 Jun 2009



Current Challenge in Consumer Health Informatics: Bridging the Gap between Access to Information and Information Understanding
Laurence Alpay, John Verhoef, Bo Xie, Dov Te’eni and J.H.M. Zwetsloot-Schonk
Biomedical Informatics Insights 2009:2 1-10
Published on 03 Apr 2009 | Highly accessed (previous month)



Avoiding Pitfalls in the Statistical Analysis of Heterogeneous Tumors
David E. Axelrod, Naomi Miller and Judith-Anne W. Chapman
Biomedical Informatics Insights 2009:2 11-18
Published on 30 Mar 2009



HIPAA, HIPAA, Hooray? Current Challenges and Initiatives in Health Informatics in the United States
Sanjaya Joshi
Biomedical Informatics Insights 2008:1 45-54
Published on 03 Dec 2008



Planning for Hospital IT Implementation: A New Look at the Business Case
Nir Menachemi, Ebrahim Randeree, Darrell E. Burke and Eric W. Ford
Biomedical Informatics Insights 2008:1 29-44
Published on 28 Nov 2008



Closing the Loop: Facilitating the Use of Autopsy Information in Medical Decision Making and Managed Care
Peter N. Nemetz
Biomedical Informatics Insights 2008:1 21-28
Published on 23 Jul 2008



Artificial Neural Networks for Early Prediction of Mortality in Patients with Non Variceal Upper GI Bleeding (UGIB)
Enzo Grossi, Riccardo Marmo, Marco Intraligi and Massimo Buscema
Biomedical Informatics Insights 2008:1 7-19
Published on 24 Jun 2008



Experiences from the Architectural Migration of a Joint Replacement Surgery Information System
Samuli Niiranen, Ari Välimäli and Jari Yli-Hietanen
Biomedical Informatics Insights 2008:1 1-5
Published on 20 May 2008



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It's a great experience publishing with Biomedical Informatics Insights. I am particularly impressed with the in-depth and constructive comments provided by the reviewers within such a short time-frame. The typesetting was not only prompt, but most importantly, effective. In fact, this was among the very few publication experiences that I have had when no correction was needed in the author proofs. I highly recommend Biomedical Informatics Insights to both readers and prospective ...
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