Molecular Phylogeny of Edge Hill Virus Supports its Position in the Yellow Fever Virus Group and Identifies a New Genetic Variant (774 Views)

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Maximum Likelihood Analyses of 3,490 rbcL Sequences: Scalability of Comprehensive Inference Versus Group-Specific Taxon Sampling (975 Views)

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An Application of Supertree Methods to Mammalian Mitogenomic Sequences (913 Views)

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Relative Codon Adaptation Index, a Sensitive Measure of Codon Usage Bias (889 Views)

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A Comparative Taxonomy of Parallel Algorithms for RNA Secondary Structure Prediction (1080 Views)

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Comparative Molecular Evolution of Trichoderma Chitinases in Response to Mycoparasitic Interactions (1249 Views)

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Clustering Protein Sequences Using Affinity Propagation Based on an Improved Similarity Measure (1435 Views)

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Snapshots of Tree Space (1580 Views)

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Genome-Wide Identification and Evolutionary Analysis of the Animal Specific ETS Transcription Factor Family (1699 Views)

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A Model for Protein Sequence Evolution Based on Selective Pressure for Protein Stability: Application to Hemoglobins (1885 Views)

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On the Use of Bootstrapped Topologies in Coalescent-Based Bayesian MCMC Inference: A Comparison of Estimation and Computational Efficiencies (2695 Views)

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PhyLIS: A Simple GNU/Linux Distribution for Phylogenetics and Phyloinformatics (2629 Views)

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A Comprehensive Analysis of Gene Expression Evolution Between Humans and Mice (2657 Views)

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Initial Implementation of a Comparative Data Analysis Ontology (2067 Views)

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A Mixture Model and a Hidden Markov Model to Simultaneously Detect Recombination Breakpoints and Reconstruct Phylogenies (1827 Views)

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Phylogenetic Applications of the Minimum Contradiction Approach on Continuous Characters (1740 Views)

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Phylogenetic Analyses Reveal Monophyletic Origin of the Ergot Alkaloid Gene dmaW in Fungi (1730 Views)

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Evolution and Functional Diversification of the GLI Family of Transcription Factors in Vertebrates (1891 Views)

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REFGEN and TREENAMER: Automated Sequence Data Handling for Phylogenetic Analysis in the Genomic Era (2363 Views)

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The Austronesian Basic Vocabulary Database: From Bioinformatics to Lexomics (3523 Views)

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Evidence for a Complex Mosaic Genome Pattern in a Full-length Hepatitis C Virus Sequence (1648 Views)

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Inconsistent Distances in Substitution Matrices can be Avoided by Properly Handling Hydrophobic Residues (1692 Views)

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Bayesian, Maximum Parsimony and UPGMA Models for Inferring the Phylogenies of Antelopes Using Mitochondrial Markers (3026 Views)

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Minimum Contradiction Matrices in Whole Genome Phylogenies (1868 Views)

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Estimation of Genetic Effects and Genotype-Phenotype Maps (2464 Views)

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Testing the Accuracy of Eukaryotic Phylogenetic Profiles for Prediction of Biological Function (2121 Views)

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Electrostatic and Functional Analysis of the Seven-Bladed WD β-Propellers (1822 Views)

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Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification (8284 Views)

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Exploring the Evolutionary History of the Differentially Expressed Genes between Human Populations: Action of Recent Positive Selection (5731 Views)

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Maximum Gene-Support Tree (2445 Views)

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Examining Ancient Inter-domain Horizontal Gene Transfer (2701 Views)

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Strategies for Reliable Exploitation of Evolutionary Concepts in High Throughput Biology (2267 Views)

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Dissection of Functional Residues in Receptor Activity-Modifying Proteins Through Phylogenetic and Statistical Analyses (2191 Views)

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Assessing the Evolution of Gene Expression Using Microarray Data (3078 Views)

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Identifying Coevolving Partners from Paralogous Gene Families (2860 Views)

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The ABCs of MGR with DCJ (2157 Views)

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Comparative Evolutionary Histories of the Fungal Chitinase Gene Family Reveal Non-Random Size Expansions and Contractions due to Adaptive Natural Selection (3273 Views)

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Expected Anomalies in the Fossil Record (2544 Views)

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How to Summarize Estimates of Ancestral Divergence Times (3340 Views)

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A Simple Derivation of the Distribution of Pairwise Local Protein Sequence Alignment Scores (6843 Views)

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Why Should We Care About Molecular Coevolution? (2910 Views)

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Detecting Microsatellites in Genome Data: Variance in Definitions and Bioinformatic Approaches Cause Systematic Bias (2798 Views)

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Reverse Conservation Analysis Reveals the Specificity Determining Residues of Cytochrome P450 Family 2 (CYP 2) (2192 Views)

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SPR Distance Computation for Unrooted Trees (3094 Views)

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Evolution of the Influenza A Virus: Some New Advances (2716 Views)

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The 2006 NESCent Phyloinformatics Hackathon: A Field Report (2714 Views)

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Phylogenetic Study of the Evolution of PEP-Carboxykinase (1647 Views)

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Efficient Tree Searches with Available Algorithms (1525 Views)

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Structural Evolution of the ABC Transporter Subfamily B (1726 Views)

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An Insulin-Like Modular Basis for the Evolution of Glucose Transporters (GLUT) with Implications for Diabetes (2255 Views)

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